CDS

Accession Number TCMCG007C54707
gbkey CDS
Protein Id XP_009114605.1
Location 17580626..17583067
Gene LOC103839866
GeneID 103839866
Organism Brassica rapa

Protein

Length 813aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009116357.3
Definition origin of replication complex subunit 1B [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category L
Description Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. Binds to the ARS consensus sequence (ACS) of origins of replication (By similarity). H3K4me3 effector that regulates positively the transcription of a subset of genes
KEGG_TC -
KEGG_Module M00284        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K02603        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04111        [VIEW IN KEGG]
ko04113        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04111        [VIEW IN KEGG]
map04113        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000808        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005664        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006270        [VIEW IN EMBL-EBI]
GO:0006277        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009566        [VIEW IN EMBL-EBI]
GO:0009567        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010385        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCTTCAACTCCGAGAGCCAAAACCTTCCAATCCCCAAACAAAACCCCAACTAACAACATCTATCGCAAATCGTATCTATCTCCTTCTTCAACAACGCCATCGCATCTCACTCCACAAACTCCACAGACTCTCACTCCTCTCCGCAGATCCGCTCGCCATGTCTCCCGCAAGATCGATCTCGGAGACATCGACCAAGAGATTCTCAATCCTCCGATTGAAGAAATGAATCTCATCCGAAAACGAGAGAGAGCGCCCAGAAAACAACCCACCGATGTTCTCCAAACTCCGAAGAAGAGCAAATCCAATGTCGACGGAGATGCGGAGGTTTCCTTCTCTCCTGTATCCCCGATTCGTTCGGAGAAGAAGAGGAAAACCGCCGAAAGAAGCTCCAACAAGAGAGTCCACTACACCAAAGTCGAATTCGACTCCGTCGAGTTCCAAATCGGAGACGATGTTTACGTTAAGAGAAAAGAAGACGAAGAAGACGACGCCGAATTCGAAGATTGCCGGATCTGCTTCAAATCAGGAAGTAGCAACAACGTGATGCTCGAGTGCGACGACTGCTTAGGCGGATTCCATCTCAAATGCTTGAAGCCGCCGTTGAGAGAAGTCCCCGAAGGCGATTGGATCTGTCACTTTTGTCAAGGCCACACGCTCGAGGCTCCCAAGCCTCCGGAAGGGAAGAAGGTGGCGAGGACCGCGAGGGAGAAGCTTCTCTCCAGCGATCTATGGGCTGCTCGGATCGAGAAGCTATGGAGAGGAGCGGACGGTGTGTATTGGGTTCGTGCTCGTTGGTATTTGATTCCTGAAGAGACTGCTTCGGGGCGTCAAGCGCATAACTTGAAACGAGAGGTTTATTTAACGAATGATTTTGCTGACGTGGAGATGAGATCTGTGCTTAGGCATTGTTTTGTCAAGTCTCCTAAGGAGTTTGCGAAGGCTAGTAACGATGGTGATGATGTGTTTTTGTGTGAGTATGAGTACGATGTGCATTGGCATAGCTTCAAGCGTTTGGCTGAGTTGGCTGATGGAGATTGCGAGAGTGATGACCATGAGTGGATGAAAGAAGAAGAAGAGGTTGGTGATAGTGATGACGAAGAGATGGAGGTTGAAGATGAAGGAAGTGTGCGTGATTCCAAGAGTAAGAGAGGTTTAGCGAGTTCAAAAGCTGCTAATTCGCTTAAAGGAAGGTTCTTTGGACTCGACAAGGTGGGAGCGAAGAGGATTCCTGAGCATGTGAGATGCCATAAGCAGAGTGAGTTGGAGAAAGCGAAAGCTACTTTGTTGTTGGCGACAAGGCCTAAGTCTCTTCCTTGTAGGAACAAGGAGATGGAAGAGATCACTGCGTTTATAAAAGGTTCCATCTCGGATGATCAGTGTTTAGGAAGGTGTATGTACATTCACGGTGTTCCCGGGACAGGGAAGACTGTTAGTGTGCTATCTGTTATGAAGAATCTGAAGGCTGAGGTTGAAGCAGGGATCGTAAGCCCGTATTGCTTCGTGGAGATCAACGGTCTCAAGCTGGCTTCGCCTGAGAAGATTTACACTGTGATCTACGAGGCATTGAGTGGTCATCGCGTTGGTTGGAAGAAAGCTTTACACTCTTTGAATGAGAGATTTTCAGAAGGGAAACGTATTGGGAAAGAGGAAGAGAAGCCTTGCATACTTCTCATTGATGAGCTTGATCTCTTGGTTACTAGAAACCAGTCGGTTCTATACAACATTTTGGATTGGCCCACCAAGCCTAACTCCAAGCTGATTGTGTTGGGGATAGCCAACACTATGGATCTTCCGGAGAAGCTGCTTCCTCGGATCTCAAGCCGGATGGGTATACAGAGACTATGTTTCGGTCCTTATAACCACACTCAGCTACAAGAGATCATTTCCACAAGGCTGAAAGGGATCGATGCTTTCGAGAAGCAAGCCATTGAGTTTGCTTCGAGGAAAGTAGCTGCGATCTCAGGAGATGCAAGACGTGCCCTCGAGATATGCAGGCGTGCAGCTGAAGTGGCGGATTACCGTCTAAAGAACAACACATCCGCAAAGAACCAGCTGGTGGTTATGTCAGATGTTGAAGCGGCGATCCAAGAGATGTTTCAAGCACCTCACATTCAAGTTATGAAGAGCGTTTCGAAACTGAGTAAGATCTACTTGACGGCTATGGTTCATGAGCTTTACAAGACAGGAATGGCTGAGACGACGTTTGATAGAGTGGCGACGACTGTCTCGTCTCTTTGCGGAACCAATGGAGAAGCTTTTCCTGGTTGGGACGTTCTTCTCAAAGTGGGTTGCGAACTTGGTGAATGCAGAATCATTCTCTGTGAGCCTGGAGAGAGGCATAGGTTGCAGAAGCTGCAGCTGAACTTTCCAAGTGATGATGTTGCTTTTGCATTGAAAGACAACAAGGAGCTTCCATGGCTGGGAAATTACTTGTGA
Protein:  
MAASTPRAKTFQSPNKTPTNNIYRKSYLSPSSTTPSHLTPQTPQTLTPLRRSARHVSRKIDLGDIDQEILNPPIEEMNLIRKRERAPRKQPTDVLQTPKKSKSNVDGDAEVSFSPVSPIRSEKKRKTAERSSNKRVHYTKVEFDSVEFQIGDDVYVKRKEDEEDDAEFEDCRICFKSGSSNNVMLECDDCLGGFHLKCLKPPLREVPEGDWICHFCQGHTLEAPKPPEGKKVARTAREKLLSSDLWAARIEKLWRGADGVYWVRARWYLIPEETASGRQAHNLKREVYLTNDFADVEMRSVLRHCFVKSPKEFAKASNDGDDVFLCEYEYDVHWHSFKRLAELADGDCESDDHEWMKEEEEVGDSDDEEMEVEDEGSVRDSKSKRGLASSKAANSLKGRFFGLDKVGAKRIPEHVRCHKQSELEKAKATLLLATRPKSLPCRNKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTVSVLSVMKNLKAEVEAGIVSPYCFVEINGLKLASPEKIYTVIYEALSGHRVGWKKALHSLNERFSEGKRIGKEEEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCFGPYNHTQLQEIISTRLKGIDAFEKQAIEFASRKVAAISGDARRALEICRRAAEVADYRLKNNTSAKNQLVVMSDVEAAIQEMFQAPHIQVMKSVSKLSKIYLTAMVHELYKTGMAETTFDRVATTVSSLCGTNGEAFPGWDVLLKVGCELGECRIILCEPGERHRLQKLQLNFPSDDVAFALKDNKELPWLGNYL